STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKS93883.1Type II secretion system protein E. (549 aa)    
Predicted Functional Partners:
KKS93884.1
Type IV pilus assembly protein PilC.
 
 
 0.974
KKS94458.1
Hypothetical protein.
 
 
 0.929
KKS93887.1
Hypothetical protein.
  
 0.736
KKS93889.1
Hypothetical protein.
  
 0.678
KKS94462.1
Type IV pilus biogenesis protein PilM.
  
 
 0.673
KKS92951.1
Signal-transducing histidine kinase.
  
 
 0.653
KKS93555.1
Pilus retraction protein PilT.
 
 
0.640
KKS94459.1
Twitching motility protein PilT.
  
 
 0.611
KKS93886.1
Outer membrane adhesin like protein proteiin.
 
     0.599
KKS93885.1
Hypothetical protein.
     
 0.546
Your Current Organism:
Parcubacteria group bacterium GW2011GWA24313
NCBI taxonomy Id: 1618826
Other names: P. group bacterium GW2011_GWA2_43_13, Parcubacteria group bacterium GW2011_GWA2_43_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.