STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ82927.1HAD-superfamily hydrolase, subfamily IIB. (251 aa)    
Predicted Functional Partners:
KKQ82928.1
Hypothetical protein.
    
  0.960
KKQ83605.1
Ketose-bisphosphate aldolase, class-II.
    
  0.920
KKQ83595.1
Glycosyltransferase involved in cell wall biogenesis.
    
 0.878
KKQ83420.1
Membrane-associated phospholipid phosphatase.
    
 0.859
KKQ82694.1
Glycosyl transferase group 1.
   
 0.846
KKQ82696.1
Glycosyl transferase group 1.
   
 0.846
KKQ82637.1
Hypothetical protein.
    
  0.835
KKQ83604.1
Oxidoreductase.
    
  0.816
KKQ83055.1
Threonine-tRNA ligase.
    
  0.788
KKQ82926.1
Glycosidase-related protein.
       0.741
Your Current Organism:
Parcubacteria group bacterium GW2011GWB1388
NCBI taxonomy Id: 1618864
Other names: P. group bacterium GW2011_GWB1_38_8, Parcubacteria group bacterium GW2011_GWB1_38_8
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