STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKR46329.1Agmatinase; Belongs to the arginase family. (278 aa)    
Predicted Functional Partners:
KKR46328.1
Putative pyruvoyl-dependent arginine decarboxylase.
    
 0.958
KKR46977.1
Hypothetical protein.
  
 0.943
KKR46638.1
Spermine synthase.
  
 
 0.914
KKR46976.1
S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
    
 0.900
gatA
Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
    
 0.848
KKR46358.1
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.799
ilvE
Hypothetical protein; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
 0.718
KKR46958.1
Peptidase M10A and M12B matrixin and adamalysin.
    
 0.702
KKR46419.1
Inosine-5'-monophosphate dehydrogenase.
  
 
  0.550
leuS
Leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
   0.547
Your Current Organism:
Parcubacteria group bacterium GW2011GWB14014
NCBI taxonomy Id: 1618865
Other names: P. group bacterium GW2011_GWB1_40_14, Parcubacteria group bacterium GW2011_GWB1_40_14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.