STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKP55949.1Hypothetical protein. (61 aa)    
Predicted Functional Partners:
KKP55950.1
Hypothetical protein.
       0.773
KKP55951.1
Glycoside hydrolase 15-like protein, phosphorylase kinase alpha/beta subunit.
       0.682
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
       0.406
Your Current Organism:
Parcubacteria group bacterium GW2011GWC13410
NCBI taxonomy Id: 1618891
Other names: P. group bacterium GW2011_GWC1_34_10, Parcubacteria group bacterium GW2011_GWC1_34_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.