STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKP89886.1Hypothetical protein. (185 aa)    
Predicted Functional Partners:
leuS
Leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.706
polA
DNA-directed DNA polymerase I, DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.588
dnaK
Molecular chaperone DnaK, molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
     
 0.582
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.568
KKP90452.1
Single-stranded DNA-binding protein.
  
 
 0.491
KKP89803.1
methionyl-tRNA synthetase, methionyl-tRNA synthetase.
  
  
 0.470
pheT
phenylalanyl-tRNA synthetase subunit beta, phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.454
KKP89513.1
Ribonuclease H.
   
 
 0.439
ligA
Ligase protein; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
   
 
 0.431
KKP89481.1
ATP-dependent DNA helicase.
   
 
 0.418
Your Current Organism:
Parcubacteria group bacterium GW2011GWC136108
NCBI taxonomy Id: 1618894
Other names: P. group bacterium GW2011_GWC1_36_108, Parcubacteria group bacterium GW2011_GWC1_36_108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.