Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KKP33053.1 | KKP33054.1 | UR22_C0003G0052 | UR22_C0003G0053 | Hypothetical protein. | Plasmid stabilization system. | 0.671 |
KKP33053.1 | KKP33055.1 | UR22_C0003G0052 | UR22_C0003G0054 | Hypothetical protein. | Hypothetical protein. | 0.671 |
KKP33053.1 | KKP33057.1 | UR22_C0003G0052 | UR22_C0003G0056 | Hypothetical protein. | Hypothetical protein. | 0.433 |
KKP33053.1 | clpP | UR22_C0003G0052 | UR22_C0003G0051 | Hypothetical protein. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.472 |
KKP33053.1 | tig | UR22_C0003G0052 | UR22_C0003G0055 | Hypothetical protein. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.585 |
KKP33054.1 | KKP33053.1 | UR22_C0003G0053 | UR22_C0003G0052 | Plasmid stabilization system. | Hypothetical protein. | 0.671 |
KKP33054.1 | KKP33055.1 | UR22_C0003G0053 | UR22_C0003G0054 | Plasmid stabilization system. | Hypothetical protein. | 0.773 |
KKP33054.1 | KKP33057.1 | UR22_C0003G0053 | UR22_C0003G0056 | Plasmid stabilization system. | Hypothetical protein. | 0.490 |
KKP33054.1 | clpP | UR22_C0003G0053 | UR22_C0003G0051 | Plasmid stabilization system. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.457 |
KKP33054.1 | tig | UR22_C0003G0053 | UR22_C0003G0055 | Plasmid stabilization system. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.676 |
KKP33055.1 | KKP33053.1 | UR22_C0003G0054 | UR22_C0003G0052 | Hypothetical protein. | Hypothetical protein. | 0.671 |
KKP33055.1 | KKP33054.1 | UR22_C0003G0054 | UR22_C0003G0053 | Hypothetical protein. | Plasmid stabilization system. | 0.773 |
KKP33055.1 | KKP33057.1 | UR22_C0003G0054 | UR22_C0003G0056 | Hypothetical protein. | Hypothetical protein. | 0.490 |
KKP33055.1 | clpP | UR22_C0003G0054 | UR22_C0003G0051 | Hypothetical protein. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.418 |
KKP33055.1 | tig | UR22_C0003G0054 | UR22_C0003G0055 | Hypothetical protein. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.671 |
KKP33057.1 | KKP33053.1 | UR22_C0003G0056 | UR22_C0003G0052 | Hypothetical protein. | Hypothetical protein. | 0.433 |
KKP33057.1 | KKP33054.1 | UR22_C0003G0056 | UR22_C0003G0053 | Hypothetical protein. | Plasmid stabilization system. | 0.490 |
KKP33057.1 | KKP33055.1 | UR22_C0003G0056 | UR22_C0003G0054 | Hypothetical protein. | Hypothetical protein. | 0.490 |
KKP33057.1 | tig | UR22_C0003G0056 | UR22_C0003G0055 | Hypothetical protein. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.558 |
clpP | KKP33053.1 | UR22_C0003G0051 | UR22_C0003G0052 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | Hypothetical protein. | 0.472 |
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