node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KKP30892.1 | KKP32450.1 | UR22_C0035G0002 | UR22_C0011G0010 | PHP domain protein. | Single-stranded-DNA-specific exonuclease RecJ. | 0.642 |
KKP30892.1 | recA | UR22_C0035G0002 | UR22_C0020G0005 | PHP domain protein. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.452 |
KKP30892.1 | ruvA | UR22_C0035G0002 | UR22_C0030G0002 | PHP domain protein. | Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.880 |
KKP32450.1 | KKP30892.1 | UR22_C0011G0010 | UR22_C0035G0002 | Single-stranded-DNA-specific exonuclease RecJ. | PHP domain protein. | 0.642 |
KKP32450.1 | KKP32898.1 | UR22_C0011G0010 | UR22_C0005G0031 | Single-stranded-DNA-specific exonuclease RecJ. | UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. | 0.826 |
KKP32450.1 | KKP33221.1 | UR22_C0011G0010 | UR22_C0001G0034 | Single-stranded-DNA-specific exonuclease RecJ. | Hypothetical protein. | 0.642 |
KKP32450.1 | KKP33318.1 | UR22_C0011G0010 | UR22_C0001G0131 | Single-stranded-DNA-specific exonuclease RecJ. | PIF1 helicase. | 0.882 |
KKP32450.1 | nusB | UR22_C0011G0010 | UR22_C0011G0021 | Single-stranded-DNA-specific exonuclease RecJ. | N utilization substance protein B-like protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.586 |
KKP32450.1 | recA | UR22_C0011G0010 | UR22_C0020G0005 | Single-stranded-DNA-specific exonuclease RecJ. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.863 |
KKP32450.1 | ruvA | UR22_C0011G0010 | UR22_C0030G0002 | Single-stranded-DNA-specific exonuclease RecJ. | Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.880 |
KKP32450.1 | ruvB | UR22_C0011G0010 | UR22_C0029G0011 | Single-stranded-DNA-specific exonuclease RecJ. | Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.896 |
KKP32450.1 | ruvC | UR22_C0011G0010 | UR22_C0008G0039 | Single-stranded-DNA-specific exonuclease RecJ. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.554 |
KKP32450.1 | topA | UR22_C0011G0010 | UR22_C0008G0023 | Single-stranded-DNA-specific exonuclease RecJ. | Topoisomerase protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...] | 0.896 |
KKP32898.1 | KKP32450.1 | UR22_C0005G0031 | UR22_C0011G0010 | UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. | Single-stranded-DNA-specific exonuclease RecJ. | 0.826 |
KKP32898.1 | KKP33318.1 | UR22_C0005G0031 | UR22_C0001G0131 | UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. | PIF1 helicase. | 0.967 |
KKP32898.1 | nusB | UR22_C0005G0031 | UR22_C0011G0021 | UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. | N utilization substance protein B-like protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.677 |
KKP32898.1 | recA | UR22_C0005G0031 | UR22_C0020G0005 | UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.973 |
KKP32898.1 | ruvA | UR22_C0005G0031 | UR22_C0030G0002 | UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. | Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.534 |
KKP32898.1 | ruvB | UR22_C0005G0031 | UR22_C0029G0011 | UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. | Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.546 |
KKP32898.1 | ruvC | UR22_C0005G0031 | UR22_C0008G0039 | UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.489 |