Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APT91903.1Beta-hydroxylase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (204 aa)    
Predicted Functional Partners:
APT92942.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.892
APT91902.1
Adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.759
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.750
APT93290.1
Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.705
APT91901.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.669
APT93609.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.624
APT93608.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.517
xseB
Hypothetical protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
 
     0.406
Your Current Organism:
Corynebacterium phocae
NCBI taxonomy Id: 161895
Other names: C. phocae, CCUG 38205, CIP 105741, DSM 44612, JCM 12105, strain M408/89/1
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