Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
APT92088.1Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)    
Predicted Functional Partners:
APT93363.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.907
APT93634.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.835
APT92087.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.835
APT92089.1
Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.788
arc
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.765
APT92651.1
Acetoin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.763
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.757
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.738
APT92579.1
Tetratricopeptide repeat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.738
APT92804.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.738
Your Current Organism:
Corynebacterium phocae
NCBI taxonomy Id: 161895
Other names: C. phocae, CCUG 38205, CIP 105741, DSM 44612, JCM 12105, strain M408/89/1
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