STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE38067.1Heme oxygenase. (122 aa)    
Predicted Functional Partners:
dtxR
Iron (metal) dependent repressor, DtxR family.
      
 0.837
amn
AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.
       0.790
hemL
Glutamate-1-semialdehyde-2,1-aminomutase.
      
 0.672
gpt
Putative phosphoribosyltransferase.
       0.628
ftn
Ferritin-like protein; Iron-storage protein.
  
  
 0.617
AKE40196.1
Two component transcriptional regulator, LuxR family.
      
 0.603
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
      
 0.575
AKE38066.1
Putative acetyltransferase/hydrolase with alpha/beta hydrolase fold.
       0.498
AKE40155.1
Signal transduction histidine kinase.
      
 0.471
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
      
 0.426
Your Current Organism:
Corynebacterium camporealensis
NCBI taxonomy Id: 161896
Other names: ATCC BAA-77, C. camporealensis, CCUG 39412, CECT 4897, CIP 105508, DSM 44610, JCM 11664, strain CRS-51
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