STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE38236.1acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. (570 aa)    
Predicted Functional Partners:
AKE38235.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
  
 
0.942
AKE38232.1
3-oxoacyl-(acyl-carrier protein) reductase.
  
 
 0.938
AKE39773.1
Fatty acid synthase, bacterial type.
  
 
 0.938
AKE40068.1
Polyketide synthase family protein.
 
 0.913
fadD15
AMP-forming long-chain acyl-CoA synthetase.
 
 
0.855
AKE38537.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
  
 
0.851
AKE38066.1
Putative acetyltransferase/hydrolase with alpha/beta hydrolase fold.
     
  0.800
rplF
Ribosomal protein L6, bacterial type; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.696
AKE40212.1
3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.642
AKE38780.1
acyl-CoA synthetase/AMP-acid ligase.
 
 
0.598
Your Current Organism:
Corynebacterium camporealensis
NCBI taxonomy Id: 161896
Other names: ATCC BAA-77, C. camporealensis, CCUG 39412, CECT 4897, CIP 105508, DSM 44610, JCM 11664, strain CRS-51
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