STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE38769.1Hypothetical protein. (370 aa)    
Predicted Functional Partners:
AKE38771.1
Nucleoside-diphosphate-sugar epimerase.
       0.796
sqdX
Glycosyltransferase.
       0.788
AKE38772.1
Hypothetical protein.
       0.660
pheT
phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.611
AKE38100.1
Cell wall arabinan synthesis protein.
  
   0.537
AKE38384.1
Type VII secretion protein EccB, Actinobacterial.
  
   0.537
AKE38396.1
Hypothetical protein.
  
   0.537
AKE38412.1
Hypothetical protein.
  
   0.537
AKE38559.1
Concanavalin A-like lectin/glucanases superfamily.
  
   0.537
AKE38823.1
Hypothetical protein.
  
   0.537
Your Current Organism:
Corynebacterium camporealensis
NCBI taxonomy Id: 161896
Other names: ATCC BAA-77, C. camporealensis, CCUG 39412, CECT 4897, CIP 105508, DSM 44610, JCM 11664, strain CRS-51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.