Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKE38053.1 | AKE40120.1 | UL81_00300 | UL81_10935 | Hypothetical protein. | Hypothetical protein. | 0.678 |
AKE38053.1 | cheR | UL81_00300 | UL81_05880 | Hypothetical protein. | Methyltransferase domain. | 0.443 |
AKE38298.1 | AKE38818.1 | UL81_01565 | UL81_04220 | Geranylgeranyl reductase family protein. | Septum formation initiator. | 0.521 |
AKE38298.1 | cheR | UL81_01565 | UL81_05880 | Geranylgeranyl reductase family protein. | Methyltransferase domain. | 0.414 |
AKE38480.1 | cheR | UL81_02495 | UL81_05880 | Protein of unknown function (DUF3151). | Methyltransferase domain. | 0.402 |
AKE38818.1 | AKE38298.1 | UL81_04220 | UL81_01565 | Septum formation initiator. | Geranylgeranyl reductase family protein. | 0.521 |
AKE38818.1 | cheR | UL81_04220 | UL81_05880 | Septum formation initiator. | Methyltransferase domain. | 0.428 |
AKE39777.1 | cheR | UL81_09160 | UL81_05880 | Hypothetical protein. | Methyltransferase domain. | 0.491 |
AKE40068.1 | cheR | UL81_10675 | UL81_05880 | Polyketide synthase family protein. | Methyltransferase domain. | 0.428 |
AKE40068.1 | qcrA | UL81_10675 | UL81_07950 | Polyketide synthase family protein. | Rieske Fe-S protein. | 0.844 |
AKE40120.1 | AKE38053.1 | UL81_10935 | UL81_00300 | Hypothetical protein. | Hypothetical protein. | 0.678 |
AKE40120.1 | cheR | UL81_10935 | UL81_05880 | Hypothetical protein. | Methyltransferase domain. | 0.463 |
cheR | AKE38053.1 | UL81_05880 | UL81_00300 | Methyltransferase domain. | Hypothetical protein. | 0.443 |
cheR | AKE38298.1 | UL81_05880 | UL81_01565 | Methyltransferase domain. | Geranylgeranyl reductase family protein. | 0.414 |
cheR | AKE38480.1 | UL81_05880 | UL81_02495 | Methyltransferase domain. | Protein of unknown function (DUF3151). | 0.402 |
cheR | AKE38818.1 | UL81_05880 | UL81_04220 | Methyltransferase domain. | Septum formation initiator. | 0.428 |
cheR | AKE39777.1 | UL81_05880 | UL81_09160 | Methyltransferase domain. | Hypothetical protein. | 0.491 |
cheR | AKE40068.1 | UL81_05880 | UL81_10675 | Methyltransferase domain. | Polyketide synthase family protein. | 0.428 |
cheR | AKE40120.1 | UL81_05880 | UL81_10935 | Methyltransferase domain. | Hypothetical protein. | 0.463 |
cheR | corA | UL81_05880 | UL81_05875 | Methyltransferase domain. | Magnesium Mg(2+) and cobalt Co(2+) transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family. | 0.662 |
page 1 of 2