STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE39319.1Protein of unknown function (DUF4193). (96 aa)    
Predicted Functional Partners:
rbpA
Protein of unknown function (DUF4109); Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.773
AKE39133.1
MerR HTH family regulatory protein.
  
     0.772
AKE39562.1
Protein of unknown function (DUF4191).
  
     0.764
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.762
AKE39610.1
Protein of unknown function (DUF3052).
  
     0.755
AKE39355.1
Protein of unknown function (DUF349).
  
     0.753
AKE39551.1
Protein of unknown function (DUF3043).
  
     0.746
AKE38639.1
Putative hydrolase.
  
     0.740
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.738
AKE39326.1
Protein of unknown function (DUF3039).
  
     0.728
Your Current Organism:
Corynebacterium camporealensis
NCBI taxonomy Id: 161896
Other names: ATCC BAA-77, C. camporealensis, CCUG 39412, CECT 4897, CIP 105508, DSM 44610, JCM 11664, strain CRS-51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.