STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKR84096.1Polymerase III, delta subunit protein. (325 aa)    
Predicted Functional Partners:
KKR84873.1
DNA-directed DNA polymerase, delta prime subunit.
 
 
 0.999
KKR84753.1
Polymerase III, alpha subunit protein.
  
 0.999
KKR84097.1
Polymerase protein.
     
 0.925
KKR83908.1
Replicative DNA helicase.
   
 0.924
KKR84217.1
Ligase protein.
     
 0.904
KKR83985.1
Hypothetical protein.
    
 0.894
KKR84938.1
Gyrase subunit B protein.
    
 0.877
KKR84219.1
Periplasmic sensor hybrid histidine kinase.
  
 
  0.852
KKR84158.1
Ribonuclease H.
    
 0.808
KKR84780.1
LexA repressor.
    
  0.805
Your Current Organism:
Uhrbacteria bacterium GW2011GWA24110
NCBI taxonomy Id: 1618977
Other names: C. Uhrbacteria bacterium GW2011_GWA2_41_10, Candidatus Uhrbacteria bacterium GW2011_GWA2_41_10, Parcubacteria (Uhrbacteria) bacterium GW2011_GWA2_41_10
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