STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crgAUncharacterized protein family (UPF0233); Involved in cell division; Belongs to the CrgA family. (91 aa)    
Predicted Functional Partners:
pbp2A
Cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain.
   
 
 0.948
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
 
 0.841
AJI77601.1
PFAM: Protein kinase domain.
     
 0.820
AJI77605.1
FHA domain-containing protein; PFAM: FHA domain.
  
  
 0.815
pknB
PFAM: Protein kinase domain; PASTA domain.
     
 0.773
ppp
PFAM: Protein phosphatase 2C.
     
 0.772
AJI77598.1
PFAM: Histidine kinase.
       0.771
rodA
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; PFAM: Cell cycle protein; Belongs to the SEDS family.
     
 0.765
AJI77606.1
PFAM: Protein of unknown function (DUF2662); FHA domain.
  
  
 0.749
AJI79317.1
Hypothetical protein.
  
   
 0.732
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.