Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJI77601.1PFAM: Protein kinase domain. (468 aa)    
Predicted Functional Partners:
ppp
PFAM: Protein phosphatase 2C.
 
 
 0.989
pknB
PFAM: Protein kinase domain; PASTA domain.
 
 
0.972
pbp2A
Cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain.
     
 0.944
AJI77605.1
FHA domain-containing protein; PFAM: FHA domain.
 
 
 
 0.941
AJI77606.1
PFAM: Protein of unknown function (DUF2662); FHA domain.
 
 
 
 0.937
odhI
FHA domain-containing protein; PFAM: FHA domain.
 
 
 
 0.935
rodA
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; PFAM: Cell cycle protein; Belongs to the SEDS family.
 
 
 0.926
crgA
Uncharacterized protein family (UPF0233); Involved in cell division; Belongs to the CrgA family.
     
 0.814
AJI77598.1
PFAM: Histidine kinase.
  
    0.634
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
   
  
 0.618
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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