STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI77605.1FHA domain-containing protein; PFAM: FHA domain. (150 aa)    
Predicted Functional Partners:
pknB
PFAM: Protein kinase domain; PASTA domain.
 
 
 
 0.998
odhA
PFAM: Dehydrogenase E1 component; 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component.
    
 
 0.995
pknL
PFAM: Protein kinase domain.
 
 
 
 0.990
AJI77606.1
PFAM: Protein of unknown function (DUF2662); FHA domain.
 
   
 0.987
AJI77601.1
PFAM: Protein kinase domain.
 
 
 
 0.961
pbp2A
Cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain.
 
   
 0.943
ppp
PFAM: Protein phosphatase 2C.
 
 
 0.942
rodA
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; PFAM: Cell cycle protein; Belongs to the SEDS family.
 
   
 0.926
crgA
Uncharacterized protein family (UPF0233); Involved in cell division; Belongs to the CrgA family.
  
  
 0.815
odhI
FHA domain-containing protein; PFAM: FHA domain.
  
   
 0.762
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.