STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcoPFAM: Multicopper oxidase. (493 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.909
hmuO
PFAM: Heme oxygenase.
    
 0.907
copB
Copper/silver-translocating P-type ATPase; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
 
  
 0.764
cysM
Cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: 2,3-diaminopropionate biosynthesis protein SbnA.
  
  
 0.740
AJI77614.1
Copper chaperone; PFAM: Heavy-metal-associated domain.
 
 
 0.719
AJI80080.1
Hypothetical protein.
 
  
 0.703
AJI78684.1
Transcriptional regulator; PFAM: IclR helix-turn-helix domain.
 
     0.614
AJI78689.1
PFAM: Multicopper oxidase.
 
 
 
 0.580
AJI79716.1
tRNA-Glu; IMG reference gene:2600317014.
 
   
 0.450
AJI80009.1
Hypothetical protein.
 
 
 
 0.447
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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