STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI77620.1PFAM: Alpha/beta hydrolase family. (275 aa)    
Predicted Functional Partners:
AJI77619.1
PFAM: Trypsin.
       0.615
AJI79799.1
PFAM: Secretory lipase.
  
  
 0.533
AJI79727.1
Sphingosine/diacylglycerol kinase-like enzyme; PFAM: Diacylglycerol kinase catalytic domain.
      
 0.518
AJI77618.1
Transcriptional regulator, TetR family; PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family.
       0.512
AJI78104.1
Hypothetical protein; PFAM: Sucrase/ferredoxin-like.
  
     0.510
AJI79634.1
PFAM: Thioesterase-like superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family.
  
   
 0.409
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.