STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI77637.1PFAM: HNH endonuclease. (354 aa)    
Predicted Functional Partners:
AJI77638.1
Transcriptional regulator/sugar kinase; PFAM: ROK family; MarR family.
 
     0.704
AJI77897.1
PFAM: HNH endonuclease.
  
     0.611
AJI78596.1
PFAM: HNH endonuclease.
  
     0.535
AJI79499.1
Hypothetical protein.
  
     0.532
AJI79856.1
PFAM: Acetyltransferase (GNAT) family.
  
    0.522
AJI77892.1
Hypothetical protein.
  
     0.479
AJI77639.1
TIGR00730 family protein; PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; Belongs to the LOG family.
   
   0.467
uspA4
PFAM: Universal stress protein family.
  
     0.440
yknZ
ABC-type antimicrobial peptide transport system, permease component; PFAM: MacB-like periplasmic core domain; FtsX-like permease family.
  
 
 0.438
AJI79942.1
PFAM: Domain of unknown function (DUF3367).
  
    0.405
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.