STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI77641.1Putative ATPase (AAA+ superfamily); PFAM: AAA domain; Domain of unknown function (DUF4143). (430 aa)    
Predicted Functional Partners:
AJI78156.1
Putative ATPase (AAA+ superfamily); PFAM: AAA domain; Domain of unknown function (DUF4143).
  
     0.674
AJI77640.1
PFAM: Bacterial protein of unknown function (DUF885).
       0.605
AJI77646.1
Hypothetical protein; PFAM: Fic/DOC family N-terminal; Fic/DOC family.
 
     0.597
AJI77882.1
Hypothetical protein; PFAM: Fic/DOC family.
 
     0.541
AJI80087.1
Hypothetical protein; PFAM: Fic/DOC family.
 
     0.532
AJI77639.1
TIGR00730 family protein; PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; Belongs to the LOG family.
       0.530
AJI79577.1
Putative transcriptional regulator with HTH domain; PFAM: IclR helix-turn-helix domain; Divergent AAA domain; ATP-dependent DNA helicase recG C-terminal.
  
     0.511
AJI77689.1
PFAM: Transposase DDE domain.
  
     0.503
AJI78569.1
PFAM: Transposase DDE domain.
  
     0.502
AJI79108.1
PFAM: Transposase DDE domain.
  
     0.501
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.