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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
maaAcyltransferase family protein; PFAM: Bacterial transferase hexapeptide (six repeats); Maltose acetyltransferase. (192 aa)    
Predicted Functional Partners:
hrpB
PFAM: Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal; DEAD/DEAH box helicase.
       0.823
AJI77646.1
Hypothetical protein; PFAM: Fic/DOC family N-terminal; Fic/DOC family.
       0.705
AJI77648.1
Short-chain alcohol dehydrogenase; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.658
rhtC
Putative threonine efflux protein; PFAM: LysE type translocator.
       0.580
AJI77647.1
Putative flavoprotein; PFAM: NADPH-dependent FMN reductase.
       0.516
AJI77650.1
Hypothetical protein; PFAM: S4 domain.
       0.449
AJI77651.1
Lactoylglutathione lyase family protein; PFAM: Glyoxalase-like domain.
       0.449
rmlD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.421
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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