STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI77648.1Short-chain alcohol dehydrogenase; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (233 aa)    
Predicted Functional Partners:
AJI77647.1
Putative flavoprotein; PFAM: NADPH-dependent FMN reductase.
       0.807
gcvP
PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating); Belongs to the GcvP family.
 
      0.713
rhtC
Putative threonine efflux protein; PFAM: LysE type translocator.
  
    0.691
AJI77651.1
Lactoylglutathione lyase family protein; PFAM: Glyoxalase-like domain.
  
    0.670
AJI77650.1
Hypothetical protein; PFAM: S4 domain.
       0.668
maa
Acyltransferase family protein; PFAM: Bacterial transferase hexapeptide (six repeats); Maltose acetyltransferase.
     
 0.658
hrpB
PFAM: Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal; DEAD/DEAH box helicase.
       0.655
putA
PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
   
    0.638
AJI77646.1
Hypothetical protein; PFAM: Fic/DOC family N-terminal; Fic/DOC family.
       0.539
AJI77652.1
PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain.
       0.530
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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