STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI77650.1Hypothetical protein; PFAM: S4 domain. (98 aa)    
Predicted Functional Partners:
AJI77651.1
Lactoylglutathione lyase family protein; PFAM: Glyoxalase-like domain.
       0.824
rhtC
Putative threonine efflux protein; PFAM: LysE type translocator.
       0.790
AJI77652.1
PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain.
     
 0.788
AJI77653.1
Cation/cationic drug transporter; PFAM: Small Multidrug Resistance protein.
  
    0.771
AJI77654.1
Cation/cationic drug transporter; PFAM: Small Multidrug Resistance protein.
  
    0.730
AJI77655.1
Hypothetical protein.
       0.677
AJI77648.1
Short-chain alcohol dehydrogenase; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.668
recF
DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.
  
  
 0.601
AJI77656.1
Hypothetical protein.
       0.587
hrpB
PFAM: Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal; DEAD/DEAH box helicase.
       0.568
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.