STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
aftAPFAM: Arabinofuranosyltransferase N terminal; Arabinofuranosyltransferase A C terminal. (645 aa)    
Predicted Functional Partners:
embC
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: EmbC C-terminal domain; Mycobacterial cell wall arabinan synthesis protein.
 
  
 0.981
AJI79962.1
Hypothetical protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan- peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of arabinofuranosyl (Araf) residues residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) to the arabinan domain to form terminal beta-(1->2)- linked Araf residues, which marks the end point for AG arabinan biosynthesis before decoration with mycolic acids.
  
   
 0.924
AJI77663.1
Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase.
 
   
 0.856
dprE1
decaprenylphospho-beta-D-ribofuranose 2-oxidase; PFAM: D-arabinono-1,4-lactone oxidase; FAD binding domain.
 
   
 0.856
aftC
PFAM: Protein of unknown function (DUF2029).
  
   
 0.835
AJI78767.1
PFAM: Protein of unknown function (DUF2029).
  
   
 0.833
AJI79942.1
PFAM: Domain of unknown function (DUF3367).
  
   
 0.811
AJI77669.1
Putative membrane protein; PFAM: GtrA-like protein.
 
   
 0.781
AJI77668.1
Putative membrane protein; PFAM: GtrA-like protein.
 
   
 0.780
AJI78054.1
PFAM: Protein of unknown function (DUF690); TIGRFAM: type VII secretion protein EccB, Actinobacterial.
 
  
 0.776
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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