STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI77663.1Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase. (252 aa)    
Predicted Functional Partners:
dprE1
decaprenylphospho-beta-D-ribofuranose 2-oxidase; PFAM: D-arabinono-1,4-lactone oxidase; FAD binding domain.
 
  
 0.990
aftA
PFAM: Arabinofuranosyltransferase N terminal; Arabinofuranosyltransferase A C terminal.
 
   
 0.877
AJI77668.1
Putative membrane protein; PFAM: GtrA-like protein.
 
     0.877
embC
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: EmbC C-terminal domain; Mycobacterial cell wall arabinan synthesis protein.
 
   
 0.847
AJI77669.1
Putative membrane protein; PFAM: GtrA-like protein.
 
     0.826
AJI79963.1
Decaprenyl-phosphate phosphoribosyltransferase; PFAM: UbiA prenyltransferase family; Belongs to the UbiA prenyltransferase family.
 
  
 0.803
AJI79964.1
5'-phosphoribosyl-monophospho-decaprenol phosphatase; PFAM: PAP2 superfamily.
 
   
 0.639
AJI77665.1
Hypothetical protein.
       0.635
AJI77666.1
Hypothetical protein.
       0.570
AJI77667.1
Hypothetical protein.
       0.557
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.