STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glfT1Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. (304 aa)    
Predicted Functional Partners:
glfT2
PFAM: Glycosyltransferase like family 2.
 
   
 0.952
AJI77673.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
 
  
 0.920
rfbE
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.842
glf
PFAM: UDP-galactopyranose mutase; NAD(P)-binding Rossmann-like domain; TIGRFAM: UDP-galactopyranose mutase.
 
  
 0.840
AJI78145.1
Hypothetical protein.
  
     0.756
AJI79317.1
Hypothetical protein.
  
     0.756
AJI78073.1
Dienelactone hydrolase-like enzyme; PFAM: Alpha/beta hydrolase family.
  
     0.728
AJI78937.1
Hypothetical protein.
  
     0.717
AJI79991.1
PFAM: Septum formation.
  
     0.715
AJI78319.1
Hypothetical protein.
  
     0.697
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.