Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rfbEABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter. (265 aa)    
Predicted Functional Partners:
AJI77673.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
 
 0.999
AJI79487.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
 
 
 0.895
AJI77791.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
  
 
 0.800
glfT1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
  
 0.770
AJI78301.1
Putative amidophosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain.
   
    0.742
scrB
Beta-fructosidase, levanase/invertase; PFAM: Glycosyl hydrolases family 32 N-terminal domain.
  
    0.736
AJI77674.1
Selenocysteine lyase; PFAM: Aminotransferase class-V.
 
     0.722
xerC
Tyrosine recombinase XerC subunit; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
   
    0.527
rmlD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
     
 0.507
wbbL
PFAM: Glycosyltransferase like family 2.
 
  
 0.501
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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