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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI77673.1ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter. (303 aa)    
Predicted Functional Partners:
rfbE
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.997
AJI79486.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.962
glfT1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
  
 0.920
AJI77674.1
Selenocysteine lyase; PFAM: Aminotransferase class-V.
 
     0.742
wbbL
PFAM: Glycosyltransferase like family 2.
 
  
 0.665
glfT2
PFAM: Glycosyltransferase like family 2.
 
  
 0.612
AJI78145.1
Hypothetical protein.
  
     0.587
AJI79317.1
Hypothetical protein.
  
     0.586
pknB
PFAM: Protein kinase domain; PASTA domain.
   
    0.508
glf
PFAM: UDP-galactopyranose mutase; NAD(P)-binding Rossmann-like domain; TIGRFAM: UDP-galactopyranose mutase.
  
  
 0.492
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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