Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AJI77689.1PFAM: Transposase DDE domain. (534 aa)    
Predicted Functional Partners:
AJI77688.1
Hypothetical protein.
       0.645
AJI77690.1
Hypothetical protein.
       0.559
AJI77701.1
DNA replication protein; PFAM: IstB-like ATP binding protein.
  
     0.534
AJI78426.1
DNA replication protein; PFAM: IstB-like ATP binding protein.
  
     0.534
AJI77641.1
Putative ATPase (AAA+ superfamily); PFAM: AAA domain; Domain of unknown function (DUF4143).
  
     0.503
AJI77687.1
Hypothetical protein.
       0.490
AJI78209.1
Putative ATPase (AAA+ superfamily); PFAM: AAA domain; Domain of unknown function (DUF4143).
  
     0.477
AJI77691.1
Molybdopterin synthase subunit MoaE; PFAM: MoaE protein.
       0.476
AJI77692.1
Molybdopterin biosynthesis enzyme; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain.
       0.476
moeA3
Molybdopterin biosynthesis enzyme; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
       0.476
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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