STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mmpL2Putative RND superfamily drug exporter; PFAM: MMPL family. (810 aa)    
Predicted Functional Partners:
tgt
tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]
      0.869
pks13
Mycolic acid condensase; PFAM: Thioesterase domain; Acyl transferase domain; Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
   
 
 0.632
AJI77732.1
PFAM: Major Facilitator Superfamily.
 
 
   0.542
AJI79443.1
PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein.
    
 
 0.417
AJI79089.1
PFAM: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family; Tat-translocated enzyme.
  
     0.410
AJI77730.1
PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
 
     0.401
qcrB
Menaquinol-cytochrome c reductase cytochrome b subunit precursor; PFAM: Cytochrome b(N-terminal)/b6/petB.
  
   
 0.400
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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