STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
katAPFAM: Catalase; Catalase-related immune-responsive. (518 aa)    
Predicted Functional Partners:
sodA
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 0.784
AJI79127.1
Peroxiredoxin; PFAM: AhpC/TSA family.
  
 
 0.779
sigC
PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
     
 0.696
AJI77769.1
TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats.
       0.647
otsB
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
  
 0.573
AJI77880.1
PFAM: Beta-ketoacyl synthase, C-terminal domain.
   
 0.544
fas-IB
Fatty acid synthase, bacterial type; PFAM: MaoC like domain; Acyl transferase domain; Domain of unknown function (DUF1729); Beta-ketoacyl synthase, N-terminal domain; Enoyl-(Acyl carrier protein) reductase; Beta-ketoacyl synthase, C-terminal domain.
   
 0.544
fas-IA
Fatty acid synthase, bacterial type; PFAM: MaoC like domain; Acyl transferase domain; Domain of unknown function (DUF1729); Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
   
 0.544
AJI79736.1
Acyl dehydratase; PFAM: MaoC like domain; N-terminal half of MaoC dehydratase.
   
 0.535
AJI77722.1
Putative intracellular protease/amidase; PFAM: N-terminal domain of DJ-1_PfpI family; DJ-1/PfpI family.
  
 
 0.509
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.