Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJI77814.1PFAM: Protein of unknown function (DUF1469). (164 aa)    
Predicted Functional Partners:
AJI77815.1
Hypothetical protein.
 
     0.745
AJI77813.1
Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: Alpha/beta hydrolase family.
       0.670
AJI78394.1
PFAM: Helicase conserved C-terminal domain.
  
     0.611
AJI79728.1
Protein of unknown function (DUF1794); May play a role in the intracellular transport of hydrophobic ligands.
  
     0.471
AJI79097.1
PFAM: Protein of unknown function (DUF3000).
  
     0.455
AJI78899.1
PFAM: Protein of unknown function (DUF3097).
  
     0.454
AJI79964.1
5'-phosphoribosyl-monophospho-decaprenol phosphatase; PFAM: PAP2 superfamily.
  
     0.445
AJI79112.1
DNA/RNA helicase, superfamily II; PFAM: Type III restriction enzyme, res subunit.
  
     0.431
AJI80109.1
Putative transcriptional regulator; PFAM: Uncharacterized ACR, COG1678; Belongs to the UPF0301 (AlgH) family.
  
    0.430
embC
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: EmbC C-terminal domain; Mycobacterial cell wall arabinan synthesis protein.
  
     0.424
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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