STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI77819.1Hypothetical protein. (77 aa)    
Predicted Functional Partners:
AJI77820.1
PFAM: Cation efflux family.
 
     0.946
AJI78239.1
Hypothetical protein.
  
     0.742
ctpG1
PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase.
  
  
 0.541
AJI77818.1
PFAM: Bacterial regulatory protein, arsR family.
       0.503
ywjA
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
  
 
   0.479
AJI77898.1
Hypothetical protein; PFAM: Tubby C 2.
  
     0.450
AJI77825.1
PFAM: Protein of unknown function (DUF4244).
 
     0.440
AJI77823.1
PFAM: Type II secretion system (T2SS), protein F.
  
    0.428
AJI77824.1
PFAM: Type II secretion system (T2SS), protein F.
  
    0.428
AJI77821.1
TIGRFAM: helicase/secretion neighborhood CpaE-like protein.
       0.427
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.