STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI77825.1PFAM: Protein of unknown function (DUF4244). (62 aa)    
Predicted Functional Partners:
AJI77827.1
PFAM: Putative Flp pilus-assembly TadE/G-like; TIGRFAM: helicase/secretion neighborhood TadE-like protein.
 
   
 0.872
AJI77822.1
Helicase/secretion neighborhood ATPase; PFAM: Type II/IV secretion system protein; TIGRFAM: helicase/secretion neighborhood ATPase.
     
 0.839
AJI77826.1
Hypothetical protein.
     
 0.836
AJI77823.1
PFAM: Type II secretion system (T2SS), protein F.
     
 0.799
AJI77824.1
PFAM: Type II secretion system (T2SS), protein F.
     
 0.799
AJI77821.1
TIGRFAM: helicase/secretion neighborhood CpaE-like protein.
       0.743
csm
PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, high GC gram positive type.
  
     0.512
AJI78322.1
PFAM: Protein of unknown function (DUF3152).
  
     0.504
AJI79950.1
PFAM: NYN domain.
  
     0.476
AJI77816.1
PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like.
       0.462
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.