Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJI77848.1PFAM: GDSL-like Lipase/Acylhydrolase family. (271 aa)    
Predicted Functional Partners:
AJI80015.1
PFAM: Domain of unknown function (DUF2020).
  
     0.710
AJI77849.1
PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: S-(hydroxymethyl)mycothiol dehydrogenase.
       0.706
AJI78088.1
Hypothetical protein.
  
 
   0.702
AJI79633.1
Hypothetical protein.
  
     0.693
AJI79879.1
Hypothetical protein.
  
     0.691
AJI79612.1
Hypothetical protein.
  
     0.688
AJI79650.1
PFAM: Protein of unknown function (DUF3618).
  
     0.685
AJI78794.1
Hypothetical protein.
  
     0.680
AJI79053.1
PFAM: Phosphotransferase enzyme family.
 
     0.675
AJI79817.1
Hypothetical protein.
  
     0.674
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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