Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJI77860.1PFAM: Helix-turn-helix domain; Predicted transcriptional regulator (DUF2083); Domain of unknown function (DUF955). (468 aa)    
Predicted Functional Partners:
prpD2
Uncharacterized protein involved in propionate catabolism; PFAM: MmgE/PrpD family.
 
  
 0.691
AJI79593.1
PFAM: Protein of unknown function (DUF4233).
  
     0.539
pks13
Mycolic acid condensase; PFAM: Thioesterase domain; Acyl transferase domain; Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
  
   
 0.445
AJI78763.1
Putative membrane protein; PFAM: DoxX.
  
   
 0.428
AJI79962.1
Hypothetical protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan- peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of arabinofuranosyl (Araf) residues residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) to the arabinan domain to form terminal beta-(1->2)- linked Araf residues, which marks the end point for AG arabinan biosynthesis before decoration with mycolic acids.
  
     0.412
ramA
PFAM: GAF domain; Bacterial regulatory proteins, luxR family.
   
 
 0.403
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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