Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJI77892.1Hypothetical protein. (299 aa)    
Predicted Functional Partners:
AJI79856.1
PFAM: Acetyltransferase (GNAT) family.
  
     0.736
AJI77894.1
Hypothetical protein.
 
     0.734
AJI77893.1
PFAM: Ppx/GppA phosphatase family.
       0.684
AJI78352.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1990).
  
     0.629
AJI77985.1
PFAM: Protein of unknown function (DUF3068).
  
     0.571
AJI77896.1
Transcriptional regulator, AlpA family; PFAM: Helix-turn-helix domain; TIGRFAM: DNA binding domain, excisionase family.
 
     0.549
AJI78932.1
Hypothetical protein.
  
     0.548
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.544
AJI77595.1
PFAM: HNH endonuclease.
  
     0.536
AJI78351.1
PFAM: von Willebrand factor type A domain.
  
     0.510
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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