STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yknZABC-type antimicrobial peptide transport system, permease component; PFAM: MacB-like periplasmic core domain; FtsX-like permease family. (432 aa)    
Predicted Functional Partners:
AJI77919.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.999
AJI77920.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.995
AJI79703.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.992
AJI78445.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.983
AJI78967.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.977
lolD
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.956
AJI80054.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.954
phnC-4
PFAM: ABC transporter; TIGRFAM: heme ABC exporter, ATP-binding protein CcmA.
 
 0.940
AJI79139.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
 0.866
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
   
 0.863
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.