Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJI77948.1PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase family. (413 aa)    
Predicted Functional Partners:
etfB
PFAM: Electron transfer flavoprotein domain.
  
 
 0.847
AJI77949.1
Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
 
 0.773
etfA
PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
  
 
 0.627
irp2C
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Thioesterase domain; Phosphopantetheine attachment site; Methyltransferase domain; AMP-binding enzyme; Nonribosomal peptide synthase; Condensation domain; AMP-binding enzyme C-terminal domain; TIGRFAM: amino acid adenylation domain.
  
  
 0.490
AJI79963.1
Decaprenyl-phosphate phosphoribosyltransferase; PFAM: UbiA prenyltransferase family; Belongs to the UbiA prenyltransferase family.
 
  
 0.485
fadB
PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
  
 0.474
AJI77892.1
Hypothetical protein.
  
     0.449
dop
PFAM: Pup-ligase protein; TIGRFAM: proteasome accessory factor PafA2.
  
     0.424
AJI78952.1
PFAM: Methyltransferase domain.
 
  
 0.423
arc
PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: proteasome ATPase.
 
    0.414
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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