STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI77969.1Hypothetical protein; PFAM: FAD-NAD(P)-binding. (433 aa)    
Predicted Functional Partners:
AJI77968.1
PFAM: Pyridoxal-dependent decarboxylase, pyridoxal binding domain.
     0.965
cysM
Cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: 2,3-diaminopropionate biosynthesis protein SbnA.
 
  
 0.856
AJI79627.1
PFAM: FAD-NAD(P)-binding.
 
     0.597
AJI79837.1
Transcriptional regulator; PFAM: MarR family.
  
     0.448
AJI77872.1
PFAM: Protein of unknown function (DUF2505).
  
     0.426
AJI78733.1
PFAM: Methyltransferase domain.
 
 
 0.426
AJI77636.1
PFAM: Haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
 
     0.403
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.