STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI77989.1Putative membrane protein; PFAM: ABC-type cobalt transport system, permease component. (209 aa)    
Predicted Functional Partners:
AJI77991.1
ABC-type cobalt transport system, permease component CbiQ; PFAM: Cobalt transport protein.
 
  
 0.969
theD
PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase.
  
  
 0.963
ykoD
ATPase component of various ABC-type transport systems with duplicated ATPase domain; PFAM: ABC transporter.
 
  
 0.953
AJI77992.1
Adenylate kinase-like kinase; PFAM: AAA domain.
 
    0.803
AJI79413.1
ADP-ribose pyrophosphatase; PFAM: NUDIX domain.
  
     0.516
AJI79814.1
Ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
 
     0.452
AJI77988.1
Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: BAAT / Acyl-CoA thioester hydrolase C terminal.
       0.445
thiC
Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
   
  
 0.440
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.