STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78037.1FAD/FMN-dependent dehydrogenase; PFAM: FAD binding domain. (496 aa)    
Predicted Functional Partners:
cma
Methyltransferase, cyclopropane fatty acid synthase; PFAM: Mycolic acid cyclopropane synthetase.
 
    0.949
AJI79945.1
Hypothetical protein.
  
     0.642
AJI79942.1
PFAM: Domain of unknown function (DUF3367).
 
     0.571
AJI79947.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
 
   0.527
AJI79944.1
PFAM: Protein of unknown function (DUF3068).
  
     0.494
pks13
Mycolic acid condensase; PFAM: Thioesterase domain; Acyl transferase domain; Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
  
 
 0.447
AJI77728.1
TIGRFAM: putative tRNA adenosine deaminase-associated protein.
  
     0.443
qcrC
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c; Cytochrome C oxidase, cbb3-type, subunit III.
    
   0.438
aftA
PFAM: Arabinofuranosyltransferase N terminal; Arabinofuranosyltransferase A C terminal.
 
     0.430
etfA
PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
  
 
 0.424
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.