STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78055.1PFAM: Subtilase family; TIGRFAM: type VII secretion-associated serine protease mycosin; Belongs to the peptidase S8 family. (420 aa)    
Predicted Functional Partners:
AJI78057.1
PFAM: FtsK/SpoIIIE family; TIGRFAM: type VII secretion protein EccCb; type VII secretion protein EccCa.
 
 
 0.940
AJI78056.1
TIGRFAM: type VII secretion integral membrane protein EccD.
  
  
 0.829
AJI78059.1
PFAM: Proteins of 100 residues with WXG; TIGRFAM: WXG100 family type VII secretion target; Belongs to the WXG100 family.
  
  
 0.701
AJI78058.1
TIGRFAM: type VII secretion-associated protein, Rv3446c family, C-terminal domain.
       0.678
AJI79593.1
PFAM: Protein of unknown function (DUF4233).
      
 0.654
AJI78060.1
PFAM: Proteins of 100 residues with WXG; TIGRFAM: WXG100 family type VII secretion target; Belongs to the WXG100 family.
  
  
 0.627
AJI79907.1
PFAM: LppP/LprE lipoprotein.
   
 
 0.542
AJI79908.1
PFAM: LppP/LprE lipoprotein.
   
 
 0.542
AJI78054.1
PFAM: Protein of unknown function (DUF690); TIGRFAM: type VII secretion protein EccB, Actinobacterial.
  
 
 0.520
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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