STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78055.1PFAM: Subtilase family; TIGRFAM: type VII secretion-associated serine protease mycosin; Belongs to the peptidase S8 family. (420 aa)    
Predicted Functional Partners:
AJI78057.1
PFAM: FtsK/SpoIIIE family; TIGRFAM: type VII secretion protein EccCb; type VII secretion protein EccCa.
 
 
 0.935
AJI78056.1
TIGRFAM: type VII secretion integral membrane protein EccD.
  
  
 0.837
AJI78059.1
PFAM: Proteins of 100 residues with WXG; TIGRFAM: WXG100 family type VII secretion target; Belongs to the WXG100 family.
  
  
 0.681
AJI78058.1
TIGRFAM: type VII secretion-associated protein, Rv3446c family, C-terminal domain.
       0.664
AJI78060.1
PFAM: Proteins of 100 residues with WXG; TIGRFAM: WXG100 family type VII secretion target; Belongs to the WXG100 family.
  
  
 0.634
AJI78054.1
PFAM: Protein of unknown function (DUF690); TIGRFAM: type VII secretion protein EccB, Actinobacterial.
  
 
 0.484
AJI79593.1
PFAM: Protein of unknown function (DUF4233).
      
 0.452
pepE
Xaa-Pro aminopeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain.
     
 0.447
AJI79907.1
PFAM: LppP/LprE lipoprotein.
   
 
 0.428
AJI79908.1
PFAM: LppP/LprE lipoprotein.
   
 
 0.428
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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