STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
whiB3Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (99 aa)    
Predicted Functional Partners:
whiB2
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
 
     0.723
AJI78917.1
RecB family exonuclease; PFAM: PD-(D/E)XK nuclease superfamily.
  
     0.647
AJI79225.1
PFAM: Protein of unknown function (DUF2469).
  
     0.631
AJI79262.1
Cell division initiation protein.
  
     0.629
AJI78960.1
PFAM: MerR HTH family regulatory protein.
  
     0.556
sigD
PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
       0.544
AJI80111.1
NUDIX family protein; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family.
  
     0.538
AJI79446.1
Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase.
  
     0.530
AJI78088.1
Hypothetical protein.
       0.499
AJI77922.1
Fructose-2,6-bisphosphatase; PFAM: Histidine phosphatase superfamily (branch 1).
  
     0.494
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.