Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AJI78097.1Phage shock protein C (PspC) family protein; PFAM: PspC domain. (351 aa)    
Predicted Functional Partners:
AJI78099.1
Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
  
 0.978
AJI78098.1
Phage shock protein C (PspC) family protein; PFAM: PspC domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  
 0.891
AJI80028.1
Phage shock protein A (PspA) family protein; PFAM: PspA/IM30 family.
 
 
 0.891
AJI78096.1
L-threonine aldolase; PFAM: Beta-eliminating lyase.
       0.806
AJI80010.1
PFAM: RNase_H superfamily; TIGRFAM: RecB family nuclease, putative, TM0106 family.
  
     0.763
AJI79650.1
PFAM: Protein of unknown function (DUF3618).
  
     0.757
AJI79053.1
PFAM: Phosphotransferase enzyme family.
  
     0.743
AJI78334.1
Hypothetical protein.
  
     0.733
AJI79612.1
Hypothetical protein.
  
     0.733
AJI79633.1
Hypothetical protein.
  
     0.728
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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