STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78098.1Phage shock protein C (PspC) family protein; PFAM: PspC domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (382 aa)    
Predicted Functional Partners:
AJI78099.1
Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
 
 0.985
AJI78097.1
Phage shock protein C (PspC) family protein; PFAM: PspC domain.
 
  
 0.891
AJI79703.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
  
    0.629
AJI78096.1
L-threonine aldolase; PFAM: Beta-eliminating lyase.
       0.556
AJI78095.1
Hypothetical protein.
       0.470
AJI79702.1
Putative ABC transport system permease protein; PFAM: MacB-like periplasmic core domain; FtsX-like permease family.
  
    0.439
AJI79917.1
Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
 
 0.403
tcsR3
Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
 
 0.402
AJI79544.1
PFAM: Histidine kinase.
  
     0.401
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.