STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78112.1Putative membrane protein; PFAM: Bacterial PH domain. (473 aa)    
Predicted Functional Partners:
AJI78111.1
Hypothetical protein; PFAM: Bacterial PH domain.
 
  
 0.977
AJI78109.1
Hypothetical protein.
       0.608
AJI78110.1
Putative transcriptional regulator; PFAM: Helix-turn-helix.
  
    0.603
AJI78733.1
PFAM: Methyltransferase domain.
  
     0.491
AJI77992.1
Adenylate kinase-like kinase; PFAM: AAA domain.
  
     0.488
AJI78444.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: MacB-like periplasmic core domain; FtsX-like permease family.
  
     0.444
AJI77657.1
Putative membrane protein; PFAM: Protease prsW family.
  
     0.433
AJI78160.1
Hypothetical protein.
  
     0.428
AJI78599.1
Hypothetical protein; TIGR02271+C111; PFAM: Domain of unknown function (DUF2382); PRC-barrel domain; TIGRFAM: conserved domain.
  
    0.422
AJI78285.1
PFAM: Protein of unknown function (DUF3499).
  
     0.405
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.