STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJI78151.1PFAM: Helix-turn-helix; Predicted transcriptional regulator (DUF2083); Domain of unknown function (DUF955). (435 aa)    
Predicted Functional Partners:
prpD2
Uncharacterized protein involved in propionate catabolism; PFAM: MmgE/PrpD family.
 
  
 0.853
prpB2
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.
 
     0.660
prpC2
PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; Belongs to the citrate synthase family.
  
  
 0.544
ramA
PFAM: GAF domain; Bacterial regulatory proteins, luxR family.
   
 
 0.500
AJI79593.1
PFAM: Protein of unknown function (DUF4233).
  
     0.480
crp
cAMP-binding protein; PFAM: Crp-like helix-turn-helix domain; Cyclic nucleotide-binding domain.
   
  
 0.471
Your Current Organism:
Corynebacterium singulare
NCBI taxonomy Id: 161899
Other names: C. singulare, CCUG 37330, CIP 105491, DSM 44357, IBS B52218, IFO 16162, JCM 10385, NBRC 16162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.